Gateway sites
PubMed
TAIR
NCBI
CMS Molecular Biology Resource
Molecular Toolkit - Colorado State
Characterizing Genes (Nucleotides & Amino Acids)
NCBI - BLAST
TAIR - BLAST
Plant Genome Database
Molecular Toolkit - Reverse Translation Tools
Conserved Domain Sequence and Structure Analysis
CMS Protein Domains
InterPro Scan
NCBI - BLAST
TAIR - BLAST
CMS Protein Structure Prediction
CMS Physico-Chemical Features
Phylogenitic Analysis
CMS Phylogenetic Tools
TCoffee
CLUSTALW (download)
CLUSTALX (download)
Promoter Analysis
TAIR Motif Finder
CORG multi-species DNA comparison and annotation
PLACE ( Plant Cis-acting Regulatory DNA Elements)
Misc. Tools
Primer design - IDT Oligo Analyzer
Restriction Enzyme Mapping - NEB Cutter
Hydropathy Mapping - Molecular Toolkit hydrophobicity plot |
